CDS

Accession Number TCMCG017C03694
gbkey CDS
Protein Id OMP09748.1
Location join(38393..38427,38630..39199,39307..39627,40393..40615,40986..41165,41291..41497,41914..41991,42089..42159,42268..42378,42703..43534)
GeneID InterPro:IPR007241
Organism Corchorus olitorius
locus_tag COLO4_05173

Protein

Length 875aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01012254.1
Definition Autophagy-related protein 9 [Corchorus olitorius]
Locus_tag COLO4_05173

EGGNOG-MAPPER Annotation

COG_category U
Description Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle
KEGG_TC 9.A.15.1
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko02000        [VIEW IN KEGG]
ko03029        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K17907        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04136        [VIEW IN KEGG]
ko04137        [VIEW IN KEGG]
ko04138        [VIEW IN KEGG]
ko04140        [VIEW IN KEGG]
map04136        [VIEW IN KEGG]
map04137        [VIEW IN KEGG]
map04138        [VIEW IN KEGG]
map04140        [VIEW IN KEGG]
GOs GO:0000045        [VIEW IN EMBL-EBI]
GO:0000407        [VIEW IN EMBL-EBI]
GO:0000422        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005773        [VIEW IN EMBL-EBI]
GO:0005776        [VIEW IN EMBL-EBI]
GO:0006914        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006952        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007005        [VIEW IN EMBL-EBI]
GO:0007033        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009607        [VIEW IN EMBL-EBI]
GO:0009620        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016236        [VIEW IN EMBL-EBI]
GO:0022411        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034497        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0043207        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044804        [VIEW IN EMBL-EBI]
GO:0044805        [VIEW IN EMBL-EBI]
GO:0050832        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051707        [VIEW IN EMBL-EBI]
GO:0061726        [VIEW IN EMBL-EBI]
GO:0061919        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0070925        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0098542        [VIEW IN EMBL-EBI]
GO:1903008        [VIEW IN EMBL-EBI]
GO:1905037        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGATAGTGGCGTTAAGTTCGTTGTGGTCAATAAGGGTGCAAAAGGCTGCAAATGCTCTCGGCATATTTAAGTGGAGATGTGGTGGTGAATCATCTTTGACCACAGGCTTACTAGGTGATGTGCCCCCTGAGATTGAGTTGTCTGACTATGGACGGGTACCACCAAGTCCTGGTAGTGAGAGCCCTTCGGGGCTTCTTCATGGTGAGACTCTGAGTGTGGAACCAATTGCCGACTTGGACTTGTTCTTTGAACGGCTCTATAGCTACTATTGTGAAAAAGGCCTTTGGTGCATAATTATAAAGTGGATAGTTGAGCTTCTGAGTTTGGGCTTTACCATATGTTTCTCTGGGTTTTTTTTGTTATTTGTTGATTGGAATGGTCTCCGAAATGCTAAGTGTGGAATGGATGCATTTGAGTCTGGCATTAAGCCATGTGATCTTGCTAAGGAAGCTCTTCACGAGCACCCATTAACCCCTTTAACACTTTCAAAAGCTATTATTGTTGGATATTTGGGGCTCTTTTCCATCTATTGGATATTCTGTTTTTTGAGGTTCTTTGCGCAATTGAAGGATACTCTCGGGATACGTCATTTTTATTATAACAGTCTCCATGTTACTGATAATGAAATTCAAACCATGCCATGGGCAACAATCCTTGAAAGGGTTGTCCGGTTACAAAGTTCACAACAACTCTGTGTGGTCAAGGAGCTTTCTGCTCATGATGTGGTTATGCGATTGATGCGGAAGGAGAACTACTTGATCGGAATGCTTAATAAAGGAGTGCTTGCGTTTCCTATTTCACCTTGGGTCCCAGGTGCTGGTCCAAAGGTCAAATATGGCCCTGATGGAAGACAACATCGGCTCATTTTAACAAAGACACTTGAATGGACCTTAAATTGGTGTATACTGCAGAGCATGTTTGACCGAAACTTTCGTGTTAGAACGGACTTCATTTCTAATCCTAGAACATTGAAGAAGAGGCTTATGGTTGTCGGGCTTGCTATGCTTCTTCTCTCTCCATTTCTTGTTATATTCATGCTGGTTTATCTCTTCTTAAGACATGCTGAACAATTCTATAACCATCCAAGCACAGCTTCATCCCGAAGATGGTCAAATTTGTCAAAGTGGATCTTTAGGGAATTCAATGAGGTTGACCATTTATTCAAGCATCGGATTAATAGCAGTGTAATGCATGCTTCCGAGTACCTAAAGCAATTCCCCTCACCGATTATTTCTATCATTGCAAAGTTTATCTCATTTGTATCCGGTGGCTTCGCTGCTATTTTGATCATCATTGCTTTTCTTGAAGAATCTTTGCTAGAAGGCCATATATTTGGTCGGAACTTACTTTGGTATGCAGCTGTATTTGGAACCATTACAGCTATTAGTCGGGCTGCAGTTACTGATGAACTTCTGGTGCTTGATCCAGAAGGGGCTATGTCTATGGTGGTCCAACATACACACTTTATGCCAAAGAGGTGGCGTGGTAAGGAAAACACTGAGACAGTACGGATAGAGTTTGAAACTCTATTTCAGTATACTGGAATGATGTTGGTAGAGGAGATGGCCTCAATTTTCCTCACTCCGTTCTTGCTTATGTTTGTTGTCCCAAAGCGGGTGGATGATATCTTACAGTTCATTGCTGATTATACAGTGCAGGTTGAAGGTGTTGGACATGTTTGCAGTTTTAGTGCTTTTGATTTCAAAAGCCATGGCAATGGCAATTATGGCTCTCCATATAATGTACCTCGTGCAAAAAGGAGTTCCCAGGGGAAAATGGAGAAATCATTTTTGAGTTTCCAGAGTACCTACCCTTCATGGGAGCCAAATGATCATGGTAAGCAGTTCTTGTCAAATATTAGAACTTTCAGGGAGCAAAAGTTGCAAGGGCAGGGAGGAGCTAGATATGCAAATTCTCAGGGTAGATTGTGGCAAGGTAGCCCACTGAGAACTTATGTAGATAGAAATGGCCTTTTATCAAGGGAAATGCAGCAGAATATTCCTGGCACCGGCTACAATTTGGGTTCTTTATGGCTAATTGATGCTGATCAAAAGAATCATCCATATCTTCTAGATTGGTATTATACCTCTCGAACTGACCATGTAACCAGCTATGGGAGAGAGACTGCAACAAGACCATTTGAACCAAATGAGCAACAACATGGAGATTTTTGGGCACCAACCAACATGACACACAATGAAGCAAGAGAAGAAGATTACTGGCCATACCATTATGAAGATCGGTCACAGTCACATCTTGAAGCTTCCACATCAGCGCCTTTCTTCCATGAGAGCGTAATTCGGCATCATGATACAGGTGATATAGGGCACCGTACTAGGAGCCATTGGTGGGCTAGAAGCGGTACACATGGTGCACATCCTCAAACAAGTTTTCTTGAGCCTCCTGATTTCAACCGCTATTCTTCAGACAATCATTATGAAAACTTCTCTGAGAGAAGTGTAGAAGAGCAAGAACAATTCCTTGATTGGAGTGATTCTAGGAGGTTATCCCGGACGACTGTCTTGGATGATGATCTTGAAGCTGGAGGAGGGCTTCATTTTGATGATATTTATACCAGACCACCCGAAACTCCTACTGTAAATTTAAGGCCCCTAAACTTGGGTTGA
Protein:  
MIVALSSLWSIRVQKAANALGIFKWRCGGESSLTTGLLGDVPPEIELSDYGRVPPSPGSESPSGLLHGETLSVEPIADLDLFFERLYSYYCEKGLWCIIIKWIVELLSLGFTICFSGFFLLFVDWNGLRNAKCGMDAFESGIKPCDLAKEALHEHPLTPLTLSKAIIVGYLGLFSIYWIFCFLRFFAQLKDTLGIRHFYYNSLHVTDNEIQTMPWATILERVVRLQSSQQLCVVKELSAHDVVMRLMRKENYLIGMLNKGVLAFPISPWVPGAGPKVKYGPDGRQHRLILTKTLEWTLNWCILQSMFDRNFRVRTDFISNPRTLKKRLMVVGLAMLLLSPFLVIFMLVYLFLRHAEQFYNHPSTASSRRWSNLSKWIFREFNEVDHLFKHRINSSVMHASEYLKQFPSPIISIIAKFISFVSGGFAAILIIIAFLEESLLEGHIFGRNLLWYAAVFGTITAISRAAVTDELLVLDPEGAMSMVVQHTHFMPKRWRGKENTETVRIEFETLFQYTGMMLVEEMASIFLTPFLLMFVVPKRVDDILQFIADYTVQVEGVGHVCSFSAFDFKSHGNGNYGSPYNVPRAKRSSQGKMEKSFLSFQSTYPSWEPNDHGKQFLSNIRTFREQKLQGQGGARYANSQGRLWQGSPLRTYVDRNGLLSREMQQNIPGTGYNLGSLWLIDADQKNHPYLLDWYYTSRTDHVTSYGRETATRPFEPNEQQHGDFWAPTNMTHNEAREEDYWPYHYEDRSQSHLEASTSAPFFHESVIRHHDTGDIGHRTRSHWWARSGTHGAHPQTSFLEPPDFNRYSSDNHYENFSERSVEEQEQFLDWSDSRRLSRTTVLDDDLEAGGGLHFDDIYTRPPETPTVNLRPLNLG